Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015871949.1_cds_XP_016434616.1_30655
CDS Infomation

[gene=LOC107760979] [db_xref=GeneID:107760979] [protein=pentatricopeptide repeat-containing protein At1g50270-like] [protein_id=XP_016434616.1] [location=5073..6494] [gbkey=CDS]
Sequence

ATGACATCAAAACAATATCAACAGCTCAATAATATAACAACAAAAATCCTCAATCTCCTG
AACAAAACCTGTATTTCACCTGCTCATATCTCCCAAATCCAAACTCAACTCATCCTCCAC
AATCTCCATTTCAACACTACCATTGCCCATAACTTTATCTCAGCTTGCCAATCTTTAGGT
CTCTTAAACTTTGCGTTCACCCTTTACACCAAACTTATCAAGAAGCCCCACGTTTTCATT
TGCAACACTCTCATTCAAGCATTTTCACAAACAGAAGTTAAACTAAAACAAAAGTCCATT
TCTATGTATGCCCACATGCATAAAGAACGTATTTTTCCGAATAATTACACGTACCCTTTT
GTTCTCAAGTCTTTGTCTGATCTTAAGGAGCTAAAACTAGGCCAATCTGTACATACCCAC
ATCATAAAATGGGGTCATGCGTGTGATATTTACGTTCACAACTCGTTATTGAACTTGTAT
GCTTCATGTGACAAGATTGATTTGTGTAAACAACTGTTCGACGAAATGCCTCAGAGGGAT
GTTGTTTCTTGGACAGTGATGATTATGGGTTATAGAGATTGTGGGAAGTATGATGATGCG
CTTGTTGTGTTTGAGCAAATGAGAAATGCGGGTGTGGCACCTAATCGGGTGACAATGGTG
AACGCATTATCTGCTTGTGCTAATTATGGTGCTTTGGATATGGGTATGTGGATACATGAT
TATATAAGGAGGAGTGGGTGGGAATTGGATGTGATATTAGGTACTTCATTGATAGATATG
TATGGAAAATGTGGGAAAATTGAATATAGTTTTTGGGTATTTCAAGAAATGAAACACAAG
AATGTGTATACTTGGAATGCTGTGATCAGAGGGTTGGCATTGGCTAAAATTGGGGAGGAG
GCGGTGCAATGGTTCTTTATCATGGAGCGCGAAAATGTCAACCCGGATGAAGTGACATTA
GTTGCTGTGCTTTGTGCGTGTGCATATTCCGGGATGGTTGAACATGGTAGAGAAATCTTT
TCTTGGTTGATGAACGGGAAGTATGGATTTCCACCTGGTGTGAAACACTATGCATGTATG
GTTGTTCTATTAGCGCGTTGTGGGCATTTAGAAGACGCATTTAGGATGATAAAAGAGATG
CCAATGGAACCTACGAAGAGCGTTTGGGGTGCACTGCTTGCTGGCTGCAGACTTCATGGG
AATCAAGAAATGAGTGAGTTTGCAGCTTGGAAACTTGTTGGATTGGCACCTAAGAATTCG
GCCTATTACGTTGTCTTGGCTAATTTATACGGTGAAATGGGAAGGTGGAATGACGCGGAG
AAAATTCGAGCTATGATGAAAGAGAGGGGACTATCAAAGGACTTGGGTAGTAGTTCAGTA
GAAGTTGAGGATCAAAAGGATCTAGTAGAGTTGTTAAGGTAA

Peptide Sequence

PEP ID

XP_016434616.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g50270-like [Nicotiana tabacum]
Sequence

MTSKQYQQLNNITTKILNLLNKTCISPAHISQIQTQLILHNLHFNTTIAHNFISACQSLG
LLNFAFTLYTKLIKKPHVFICNTLIQAFSQTEVKLKQKSISMYAHMHKERIFPNNYTYPF
VLKSLSDLKELKLGQSVHTHIIKWGHACDIYVHNSLLNLYASCDKIDLCKQLFDEMPQRD
VVSWTVMIMGYRDCGKYDDALVVFEQMRNAGVAPNRVTMVNALSACANYGALDMGMWIHD
YIRRSGWELDVILGTSLIDMYGKCGKIEYSFWVFQEMKHKNVYTWNAVIRGLALAKIGEE
AVQWFFIMERENVNPDEVTLVAVLCACAYSGMVEHGREIFSWLMNGKYGFPPGVKHYACM
VVLLARCGHLEDAFRMIKEMPMEPTKSVWGALLAGCRLHGNQEMSEFAAWKLVGLAPKNS
AYYVVLANLYGEMGRWNDAEKIRAMMKERGLSKDLGSSSVEVEDQKDLVELLR

Transcript Sequence

Gene sequence data has not been registered.